Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNTSSSTTLTMNDTIAAIATPLGKGAISIIKISGHNALNILKQLTQKQDFTPRYAYVCDIFSDGVLLDKALVIYFKAPYSFTGEDVCEIQCHGSPLLAQNILQACLNLGARLAKAGEFSKKAFLNHKMDLSEIEASVQLILCEDESVLNALARQLKGELKIFIEEARNNLLKLLASSEVLIDYSEEDIPSDFLKEVSFNLEKQIASFKDLLDFSNAQKQRNKGHALSIVGKPNAGKSSLLNAMLLEERALVSDIKGTTRDTIEEVIELKGHKVRLIDTAGIRESA---DEIERLGIEKSLKSLENCDIILGVFDLSKPLEKEDFNLMDTLNRTKKPCIVVLNKNDLAPKLELEILKSYLKIPYSILETNTLNSKACLKDLSQKISEFFPKLDTQNKLLLTSLAQTTALENAITELQNAKSHLDTLELFSYHILSAIENLNLLTRPYETSQMLDSMFSEFCLGK
4DCT Chain:A ((200-353))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LIGRPNVGKSSLVNAMLGEERVIVSN------DAVDTSFTYNQQEFVIVDTAGMRKKGKVYETTEKYSVLRALKAIDRSEVVAVVLDGEEGIIEQDKRIAGYAHEAGKAVVIVVNKWDAVDKDE-----------------------STMKEFEENIRDHFQFLDYAPILFMSALTKKRIHTLMPAIIKASENHSLRVQTNVLNDVIMDAVAMNPTPTHNGSRLKIYYATQVSVKP


General information:
TITO was launched using:
RESULT:

Template: 4DCT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54752 for 1001 contacts (-54.7/contact) +
2D Compatibility (PS) -15819 + (NN) -7470 + (LL) 19152
1D Compatibility (HY) -10400 + (ID) 2150
Total energy: -71439.0 ( -71.37 by residue)
QMean score : 0.486

(partial model without unconserved sides chains):
PDB file : Tito_4DCT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DCT-query.scw
PDB file : Tito_Scwrl_4DCT.pdb: