Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCGNGRFIKKVENSIELLQLNDNPKA
1FDR Chain:A ((211-228))
LCGNPQMVRDTQQLLKETRQMTKHLR
General information:
TITO was launched using:
RESULT:
Template:
1FDR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -419 for 72 contacts (-5.8/contact) +
2D Compatibility (PS) -1778 + (NN) 780 + (LL) 0
1D Compatibility (HY) -800 + (ID) 150
Total energy: -2367.0 ( -32.88 by residue)
QMean score : 0.819
(partial model without unconserved sides chains):
PDB file :
Tito_1FDR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FDR-query.scw
PDB file :
Tito_Scwrl_1FDR.pdb
: