Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHTVLQIGAGGVGSVVAHKMGMNRDVFKNIILASRSLDKCHAIKESMLKKGLGEIGVEQVDADDTQALIALIQKHKPKVVVNVALPYQDLTIMQACLETKTHYIDTANYEHPDLAKFEYKEQWAFDKAYKEAGILGVLGAGFDPGVTNAYVAHAQRHHF----DTIHTLDILDCNAGDH-----KRPFATNFNPEINLREVSSKGRYYENGKWIETKPLEI----KQVWAYPQIGEMDSYLLYHEELESLVKNVKGLRRARFFMTFSQNYLTHMKCLENVGMLGIKEIEHQGVKIVPIQFLKTL----------------------------------------------------------LPDPESLAKDTTGKTNIGCYM-TGIKNNQDKTLYIYNVCDHKKCYEEVGSQAISYTTGVPAMCAAKMICNDTWSVEHFKAGVFNVEE-LNTDPFMEELI-KQGLPYEVIER |
| 2AXQ Chain:A ((23-466)) | GKNVLLLGSGFVAQPVIDTLAANDD--INVTVACRTLANAQALAKPSG------SKAISLDVTDDSALDKVLA--DNDVVISLIPYTFHPNVVKSAIRTKTDVVTSSYISP---------ALRELEPEIVKAGITVMNEIGLDPGIDHLYAVKTID-EVHRAGGKLKSFLSYCGGLPAPEDSDNPLGYKFSWSSRGVLLALRNSAKYWKDGKIETVSSEDLMATAKPYFIYP-GYAFVCYPNRDSTLFKDLYHIPEAETVIRGTLRYQGFPEFVKALVDMGMLKDDANEIFSKPIAWNEALKQYLGAKSTSKEDLIASIDSKATWKDDEDRERILSGFAWLGLFSDAKITPRGNALDTLCARLEELMQYEDNERDMVVLQHKFGIEWADGTTETRTS-TLVDYG---KVGGYSSMAATVGYPVAIATKFVLDGTIKG----PGLLAPYSPEINDPIMKELKDKYGIYLKEKTV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AXQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177151 for 3003 contacts (-59.0/contact) +
2D Compatibility (PS) -39101 + (NN) -6574 + (LL) 1868
1D Compatibility (HY) -10400 + (ID) 3350
Total energy: -234708.0 ( -78.16 by residue)
QMean score : 0.418
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