Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEGVLNFLTNINVIFTLLGYLIGGIPFGYALMKIFYGMDITKIGSGGIGATNVLRALQSKGVSNAKQMALLVLILDLFKGMFAVFLSKLFGLDYSLQWMVAIASILGHCYSPFLNFNGGKGVSTIMGSVVLLIPIESLIGLTVWFFVGKVLKISSLASILGVGTATVLIFFVPYMHIPDSVNILKEVGTQTPMVLIFIFTLIKHAGNIFNLLTGKEKKVL |
| 2K1K Chain:A ((538-559)) | --------------------------------------------------------------------------------------------------------------PVSRGLTGGEIVAVIFGLLLGA---------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -909 for 90 contacts (-10.1/contact) +
2D Compatibility (PS) -1930 + (NN) 1686 + (LL) 16352
1D Compatibility (HY) -800 + (ID) 250
Total energy: 14149.0 ( 157.21 by residue)
QMean score : -0.215
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