Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFEKIRKILADIEDSQNEIEMLLKLANLSLGDFIEIKRGSMDMPKGVNEAFFTQLSEEVERLKELINALNKIKKGLLVF
3OCE Chain:A ((167-231))
----LHRLIAAFEAKGREFATVIKIGRTQLQDAVPITLGQE------FEAFAATLREDTARLEEVAALFREVNLGGTAI
General information:
TITO was launched using:
RESULT:
Template:
3OCE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3071 for 331 contacts (9.3/contact) +
2D Compatibility (PS) -7044 + (NN) -1106 + (LL) 584
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -9345.0 ( -28.23 by residue)
QMean score : 0.184
(partial model without unconserved sides chains):
PDB file :
Tito_3OCE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OCE-query.scw
PDB file :
Tito_Scwrl_3OCE.pdb
: