Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAETVKINSEFVTLGQLLQMIDVVSTGGMAKAYLSENTIYINGEQDNRRGKKLRNGDVILVPGVGKVKIEQGK
1DM9 Chain:A ((5-64))
-------PAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRS-KPSKIVELNATLTLRQGNDER-----
General information:
TITO was launched using:
RESULT:
Template:
1DM9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24920 for 374 contacts (-66.6/contact) +
2D Compatibility (PS) -6466 + (NN) -2279 + (LL) 1176
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -35289.0 ( -94.36 by residue)
QMean score : 0.323
(partial model without unconserved sides chains):
PDB file :
Tito_1DM9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DM9-query.scw
PDB file :
Tito_Scwrl_1DM9.pdb
: