Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQNNKSNAAHAEGGIPWKHIVGFALSVVLTLLAVWVALYSTLTTNVKVVIIFIFAFIQAALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVMEIGHMNHLL
4XPH Chain:A ((159-220))
----NRSEGIHDLGAIKWD----MALCLLIVYLICYFSLWKGISTSGKVV-WFTALFPYAVLLILLIRGLT---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4XPH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24073 for 262 contacts (-91.9/contact) +
2D Compatibility (PS) -6505 + (NN) -3747 + (LL) 4312
1D Compatibility (HY) -8400 + (ID) 1000
Total energy: -39413.0 ( -150.43 by residue)
QMean score : 0.220
(partial model without unconserved sides chains):
PDB file :
Tito_4XPH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XPH-query.scw
PDB file :
Tito_Scwrl_4XPH.pdb
: