Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMANTKTEQDFEKVLKRRDL--IAANFRWLFASQICWNYERMMSTGYLYSILPTLRKLYKTDDDLKDMMNMHNQFFNTNPMVGGLILGMDMAIEEREKKASKEVVTGLKTGLMGPFAGVGDTIFGVILPTIFGSIAAYMGLQGNVTGVVIWVLVNILVVGARFTLLPLGYKQGAKLVTEFADRLNALTDAAILLGVTVVGALIPTVIKATVPFVYKSGKVELKMQDMLDQIMPSLVPVLLVALIYALLGHKKMTSTKAILLVMVIAIILFNLKILG |
2NP0 Chain:A ((796-856)) | ----------DFDNTLKKNLLNYIDENKLYLIGSA---EYEKSKVNKYLKTIMPFDLSIYTNDTILIEMFNKYN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NP0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13473 for 279 contacts (48.3/contact) +
2D Compatibility (PS) -6183 + (NN) -1947 + (LL) 18728
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: 19021.0 ( 68.18 by residue)
QMean score : 0.032
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