Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDIQESVIGIDLGGTKILIGEVTKDGEVLNSKSY-PSNTENQTKATETLLKVLADYTQNIGFIAPKQTGIGVGLVGRVDHKSGV--WLEIEPGKSNPTPLAGILEAKTGLPVSLGNDVVCATMAEKQFGWGRETNDFIYLNVGTGLAAGFVVDGRITQGGHFNAGEVGHAVVDIHSDVLCGCGRRGCVERLASGLGIKEEALRHLNSYPTSILAETQTELTGKMVLHAAEQKDELAEKIIDNATFQLANLIMNLVRTTDPECVILGGGVTRN--EHFFQKIQDNLQSNTIRFVTKGVVRSKLEKDKVGLIGAAVIGMRLGNEGGKE |
| 3VOV Chain:A ((3-291)) | ------VVGLDLGGTKIAAG--VFDGKRLLSKVVVPTPKEGGERVAEALAEAAERAEREAGV---RGEAIGLGTPGPLDFRRGVIR---NIPGVQD-FPIRRILEEATGRPVFLENDANAAALAEHHLGAAQGEESSLYLTVSTGIGGGVVLGGRVLRGERGQGGELGHLTL-LPGGPACGCGLEGCLEALAAGRALERDATYAF-----------QRPVDTRELFRLFQAGDPKAERLVLQAARYVGIGLASLVKAFDPGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAE-AGLLGAAL------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VOV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161993 for 2478 contacts (-65.4/contact) +
2D Compatibility (PS) -30096 + (NN) -16767 + (LL) 2028
1D Compatibility (HY) -12400 + (ID) 4650
Total energy: -223878.0 ( -90.35 by residue)
QMean score : 0.443
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