Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPSMKRQIAQTGIIHRPLPIETEHALETLAKKKQVLSSRTLFSSKQHVSLEFTHQGAGDFTISGQDEIKLSSPVVMPHWPAGAPDDGDYTNFGNVTISASIGNEDWSGFNRVRIQVFPDFPGVTNPYLMISFKNDGTVKVPDIYGREGVHGVNLINHEWNDVIFEIEGLPRDRMTEMSFSYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWLPQNNTLIYSHNGYSKDMPKVAFCANKH---------AATTFTIHDKETDKVVFTGKSYQNA----TETGNFVILDFSDLQTVGEYYLKFAD-MQTEIFQIGTSEVIWESSIWKSLNFIFCERCGCPVF-GKHTT----CHA-DIIAE------HDGKQLSFNGGWHDAGDVSQQLIQTAEVTMALYEMAASLPEKE-------E---TLRMRLLEEGEWGLDFILKTRFGDGFRATSAGMTRWTDGLVGGMDDAIARV--HNQAYENFYCAGIEAYIGSQIAD-NATMQNHLLRIAEEDLLFAIKELEKHGTSQKPIFWEHTYQTSESLYYATASWAASMVYQLTNKEIYAEKAAEWLDLMLEAQEKAGIRDSETSELYKGFFYRDKSHKVIQHFNHQAREHLYLLALEAALETQPSHAEKQTWLQAVEMYGDYLKKVTRFTKPYPLIPAGLYKKDEYLDEASFHLQHLLIDERAIEEYQLQFEQGIKINDEVALRKFPIWFSFRGNNAILLSAGKAASIAGKILKDKALLDIAEGQLQWVIGMNPFGQSMMHGEGYRYAQQYSVLNGEITGEIPVGMETFRNE-D------------EPYWPEFNNATYKEVWVGNAGKWMSIVADLNKITGKS |
| 3X17 Chain:B ((13-559)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQGAQILVNQVGYHPATPKQAVLALAPGTAAGIRPGWTPTLQIVRADDGQVVWEGTMAGPSEDRLVSGDTLYRADFTSLTAPGRYVAQVVGGPRSPEFAIGP---VYRDVLYAAARSYYLQRCGVAIDDPITGVSHALDHHEDGYVLVDDPFYRAGTRLEATGGWHDAGDYGKYVTTTAVTAAQLLKAYELYPQAFADGQLHLPESGNGVPDILDEVRWGLEWLFRMQRPDGAVYHKLAGLRWPG-MIRPEQDVQRRYVYRITTQDTAKAAAAWAMAARIFAPFDAAFARKALAAAEQAWRFLAASGPILDYPAEDNSGSGPYDD--RDDADDRFWAAVELWVVTGRAEYHDYIARMARTGL----P----------AYAPVSWVNPAALGYFDYVTLG--------------QKGDPAIRARLVQRILEGARSVFQTYE-QSGYGVP-------------------IL---------------------AGSF-----HW----GSNKEALAKGMLLLFAHHLEPRPEYERAALAQLDYVLGVNPLAKSYVTGLGSNPPRNPHHRLVKASGVMVPGLLVGGPNDHPQTKAIRPHMGPRGYADVTDSYETNEPAIDYNAPLVFVAAHFASL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3X17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115846 for 4592 contacts (-25.2/contact) +
2D Compatibility (PS) -52701 + (NN) -22257 + (LL) 18932
1D Compatibility (HY) -8000 + (ID) 4600
Total energy: -184472.0 ( -40.17 by residue)
QMean score : 0.416
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