Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LSNFTAKVPLSERMADVLIS-KDRWKDDEEGYLKVKYGLEIILINVMKFALVYGIALVTGLLLQTVTVHLSYLWLRRYSFGLHATKTLNCTLISLLMFVLAPFVFQNIPSNNWIVLGTFGFILLNMFLFAPADTESLPLIGEEHRKTLKRKAMIGTLILTGIALLIPFAEMKTLIMVGSLFQVISINPLTYKLLKRRYRNYEKYE |
3E0Z Chain:A ((71-99)) | -----------KYLIHLLGNYEPDDTHDEQTVELFHMGET--------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E0Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1722 for 93 contacts (18.5/contact) +
2D Compatibility (PS) -2934 + (NN) -1807 + (LL) 16076
1D Compatibility (HY) -800 + (ID) 200
Total energy: 12057.0 ( 129.65 by residue)
QMean score : 0.163
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