Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVTSNINSELADGFQGYTDVRKITVNSTVDVGVSGSLTAVLGQVGSSFGLP-GAIGGLGVGLVLDTILSLNGTKDTWKNSINEKMQDLEDWFRVEAK
2KJF Chain:A ((14-44))
--------------------------------------VVSLINAGLTVGSIISILGGVTVG--LSGVFTA---------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KJF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8508 for 136 contacts (-62.6/contact) +
2D Compatibility (PS) -3098 + (NN) 1586 + (LL) 3800
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -8220.0 ( -60.44 by residue)
QMean score : -0.103
(partial model without unconserved sides chains):
PDB file :
Tito_2KJF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KJF-query.scw
PDB file :
Tito_Scwrl_2KJF.pdb
: