Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKKNLEQIYAIEFTMGLRYRPMQIRHNIKLIFLLLLFVTWLQGDFMNRLPGNLDITKVDMPLVLLALLCYIILYPQKMTIRFQNLQYLLYICCFQFLVFMVIRYFYSNLIYGIQNMVSLTAQTLVASYVFLLVLWILALIFFYFHFRKKLRNGDY--RKDSELQKKRSNLGLKLSKGSYILIGAFFVFILSSQIVGGIMVDIMIISIEIVGIALCSMGIVIFPEQLFTAYCKFKFKEFHIEE |
1PSB Chain:C ((62-87)) | ---------------------------------------------------------------------------------------------------------------------------------------------------KRLRRSAHARKETEFLRLKRTRLGLE--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PSB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3286 for 75 contacts (43.8/contact) +
2D Compatibility (PS) -2521 + (NN) -882 + (LL) 22812
1D Compatibility (HY) -1200 + (ID) 450
Total energy: 21045.0 ( 280.60 by residue)
QMean score : 0.752
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