Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIDLEQIYILDFTMGLRFHPLIIRKNLPLLYVAFIFLIWIQGVVMAGLPGDFDTTELDVLLAAIPALPLLILYPKKMAMKFQNVQYLLYVCFN
2KSE Chain:A ((1-131))
--------------MGKFTQRLSLRVRLTLIFLILA----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KSE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6651 for 98 contacts (-67.9/contact) +
2D Compatibility (PS) -2210 + (NN) -398 + (LL) 6952
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -4607.0 ( -47.01 by residue)
QMean score : 0.153
(partial model without unconserved sides chains):
PDB file :
Tito_2KSE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KSE-query.scw
PDB file :
Tito_Scwrl_2KSE.pdb
: