Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VITNQRDIDKYYDMLVEKNSNYEGVFFVGVKTTGILCRPTCPAKKPLKENCEFFSTAKEALLASYRPCKRCEPLSNPTKLSPAVKLLVDAIEKNPEKKWTDKDFDDLSISANTARRQFKKQFGMTFIEYARSRRLGLAFKHIRGGNSIINAQLDSGYESGNGFRDAFSKTMGEVPHKSKDITILYSAWLETKLGSMLAISDDDSLLLLEFVDRKGLETEIKKLRMRLNAAITPEKTIIIQQIEAELAQYFNGELIDFKTPIRYIGSDFQENVWEELRRIPIGETISYKGLAEKLGRSTASRAVARANGANQLSLIVPCHRVINTNGALGGYGGGLARKEWLIKHEKMVPK |
4ZYG Chain:A ((1-145)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLVYGLYKSPLGYITVAKDDKGFIMLDFCD-------CVEGNSRDDSSFT--------EFFHKLDLYFEGKPINLREPINLKTYPFRLSVFKEVMKIPWGKVMTYKQIADSLG--TSPRAVGMALSKNPILLIIP-HRVIAENG-IGGYSRGVKLKRALLELE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZYG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75699 for 1067 contacts (-70.9/contact) +
2D Compatibility (PS) -15323 + (NN) -1456 + (LL) 12068
1D Compatibility (HY) -14800 + (ID) 2500
Total energy: -97710.0 ( -91.57 by residue)
QMean score : 0.510
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