Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKIVSPMGQFFEGEVEGFVINTKEGQQTVLEEHIDCLSFFDYSEISILDAVASDPIFVALGYLHLVQN-EANIMAQFASA----DAEQAERIFERLNKRKQTESRRSNDK
2XOK Chain:H ((34-139))
--LQFALPHETLYS-EVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLCVTAIEA-PLESFS-ENIKNLLAEAKKNVSSS-------
General information:
TITO was launched using:
RESULT:
Template:
2XOK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53627 for 560 contacts (-95.8/contact) +
2D Compatibility (PS) -9971 + (NN) 484 + (LL) 268
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -67646.0 ( -120.80 by residue)
QMean score : 0.269
(partial model without unconserved sides chains):
PDB file :
Tito_2XOK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XOK-query.scw
PDB file :
Tito_Scwrl_2XOK.pdb
: