Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSEFFSTLLLIIGLLIGFFLAILLILAGIRRFFCSAEEPLKRIRRYQVWHNRYQFNEEVTSFFTVIGATLLVSLITVQITAIPFQYTVLIFWSSWLFHLLSFWKKIRVPKKMKNEMIQLAGFLLITALYFVGYFAMKSLHFSIIHVADFPGVIQFGIRTYLTICSLFVASGALIVWQRIYVKLLK |
| 1YYB Chain:A ((1-26)) | -----------------------------------SADEELEALRRQRLAELQAKHGDPGD----------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YYB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 933 for 96 contacts (9.7/contact) +
2D Compatibility (PS) -2768 + (NN) -613 + (LL) 16988
1D Compatibility (HY) 800 + (ID) 300
Total energy: 15040.0 ( 156.67 by residue)
QMean score : 0.187
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