Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFLEFHQLVKEDLLIYSWIIKNFHLTRQKLMAGGEITMNR---EQVIVMEKGLLVQVN-EEGKNDLYRVFIDQRIIFTTKGDITLTALEDTSYSIIRTDELIGKLEDQHLLPTFFLQIAEDFEKGLDWQR-TLISVDPAERAEMILVKIIERYEINSENKPEFPRWLRINVLARFAKCSVSTMSSVVNELVNEGDLNIK-GTPWLLTRPYQASCA
2FMY Chain:A ((26-214))
------------------------EFREQRYSKKAILYTPNTERNLVFLVKSGRVRVYLAYEDKEFTLAILEAGDIFCTH-TRAFIQAMEDTTILYTDIRNFQNIVVEFPAFSLNMVKVLGDLLKNSLTIINGLVFKDARLRLAEFLVQAAMDTGLKVPQGIKLELGLNTEEIALMLGTTRQTVSVLLNDFKKMGILERVNQRTLLLKDLQKLK--
General information:
TITO was launched using:
RESULT:
Template:
2FMY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91660 for 1267 contacts (-72.3/contact) +
2D Compatibility (PS) -19740 + (NN) -3616 + (LL) 2992
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -120574.0 ( -95.16 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_2FMY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FMY-query.scw
PDB file :
Tito_Scwrl_2FMY.pdb
: