Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEKIELSKRDRLRVAWR-STFIQGSWNY---ERMQNGGWAFSMIPAIKKLYK-TKEDRSQALKRHLEFFNTHPYIASPILGVTLALEEERANGAEVDDVAIQGVKVGMMGPLAGVGDPVFWFTIRPMLGALGASLALSGNILGPILFFVAWNVIRWGFMWYTQEFGYKAGSKITDDLSGGLLQDITKGASILGMFVLAALVQRWVNIQFAPIISKVKLDEGAYIDWSHLPQGAQGIKTALEQQQAGLALSEIKVTTLQNNLDNLIPGLAAVALTFLCMWLLKKKISPIIIILGLFVVGIVGHLIGLL |
| 3WVF Chain:A ((363-433)) | --------------FIVRGIMYPLTKAQYTSMAKMRM---LQPKIQAMRERLGDDKQRISQEMMALYKAEKVNPL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3129 for 250 contacts (-12.5/contact) +
2D Compatibility (PS) -5688 + (NN) -1706 + (LL) 19276
1D Compatibility (HY) -1600 + (ID) 450
Total energy: 6703.0 ( 26.81 by residue)
QMean score : 0.319
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