Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKPRIYTMSFASVYPLYIQKAEKKDRTKEEVDE--------IIFWLTG-YDQDS---LQQA-IDQAIDFETFFAEAPKMNPNASLITGVICGYRVEEIEDKLMQQIRYLDKLVDELAKGKKMEKILRK
1B0N Chain:A ((11-108))
----------------------KEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHET-----LDSEWEKLVRDAMTSGVSKKQFREFLDYQKWRKSQ---------
General information:
TITO was launched using:
RESULT:
Template:
1B0N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2537 for 346 contacts (-7.3/contact) +
2D Compatibility (PS) -8425 + (NN) -3339 + (LL) 2880
1D Compatibility (HY) 800 + (ID) 550
Total energy: -11171.0 ( -32.29 by residue)
QMean score : 0.147
(partial model without unconserved sides chains):
PDB file :
Tito_1B0N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B0N-query.scw
PDB file :
Tito_Scwrl_1B0N.pdb
: