Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VKSLSFMRVLEAVRTMLQEKGGLDISIVMRDQVEMPTTMIEMIDQEEEESQTAWKEKYRFAIHHYTNETDLAGVEKIDTLIQTGFTLPEGYKLIAVRHYGKQNLVK-ENTLIHAKTSFEVSICRELKVKI
3ZXP Chain:A ((72-169))
---------------------------------------INSLDESTQESKLRYIQNFKWT-DTLQGQVPSAQQDAVFELISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHLK---
General information:
TITO was launched using:
RESULT:
Template:
3ZXP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2880 for 471 contacts (-6.1/contact) +
2D Compatibility (PS) -8424 + (NN) 182 + (LL) 4468
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -11654.0 ( -24.74 by residue)
QMean score : 0.016
(partial model without unconserved sides chains):
PDB file :
Tito_3ZXP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZXP-query.scw
PDB file :
Tito_Scwrl_3ZXP.pdb
: