Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFEVNDTTYILRFNKQKVKTVELTSGISLVAALTANKGILSYQVIETLFVSGLVEEKGLVPVKQKEALEIFDKLVEEQGLISLNVAVIEKLQEDMGFLFR
3LCV Chain:B ((15-48))
----------------------------------------------------------------DRIDEIERAITKSRRYQTVAPATVRRL---------
General information:
TITO was launched using:
RESULT:
Template:
3LCV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12426 for 116 contacts (-107.1/contact) +
2D Compatibility (PS) -2903 + (NN) -1261 + (LL) 6316
1D Compatibility (HY) 0 + (ID) 200
Total energy: -10474.0 ( -90.29 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_3LCV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LCV-query.scw
PDB file :
Tito_Scwrl_3LCV.pdb
: