Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKIVKMSEKNEHGTLEQFYPETHAEAVKGLVSVSEEEKTIWDQKESTAGAEQKANTALNSAKDYVDTIGEGTVIFKGANLMGAGQSFKWDASKLKFGMTLLFSRYDAANNT--PQDYYYHSVFLSKAQLVELAGKGILVQMPSTTYGDRKYLYVSTTGLSGHFDNSNYAAWALRQVTIM |
3REA Chain:A ((121-177)) | -----------------------------------------------------------------------------------------------TQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEP--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3REA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1469 for 114 contacts (-12.9/contact) +
2D Compatibility (PS) -3182 + (NN) 2193 + (LL) 9732
1D Compatibility (HY) -800 + (ID) 150
Total energy: 6324.0 ( 55.47 by residue)
QMean score : -0.112
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