Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYEKVEKIINDWDP-IELFP---------LAPKDEYSQEINKIISIVQENPNIDMNVLGKGIRKIFIDS--FGENLIFKNNEDEIAEKILAL
4AXZ Chain:A ((62-137))
-FDENEKLINKIGPNIEMFAQTINTDIQKIEPNDQFG--INKTLFTEKKDNNIDFMLKDNRLRRLFYSSLNYDENKIKK-------------
General information:
TITO was launched using:
RESULT:
Template:
4AXZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -770 for 310 contacts (-2.5/contact) +
2D Compatibility (PS) -6350 + (NN) 2139 + (LL) 1620
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -9711.0 ( -31.33 by residue)
QMean score : 0.170
(partial model without unconserved sides chains):
PDB file :
Tito_4AXZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AXZ-query.scw
PDB file :
Tito_Scwrl_4AXZ.pdb
: