Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYLENCDADNLYWISEIFEDISANLKSQKFIDYLRKLDKKFPELEMTQDIDIAESYF
2K42 Chain:B ((73-108))
--------------------GHMLPDVAQRLMQHLAEHGIQ-PARNMAEHIPPAPNW-
General information:
TITO was launched using:
RESULT:
Template:
2K42.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3078 for 130 contacts (23.7/contact) +
2D Compatibility (PS) -3468 + (NN) 1980 + (LL) 1940
1D Compatibility (HY) 0 + (ID) 300
Total energy: 3230.0 ( 24.85 by residue)
QMean score : 0.271
(partial model without unconserved sides chains):
PDB file :
Tito_2K42.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K42-query.scw
PDB file :
Tito_Scwrl_2K42.pdb
: