Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWVLMKNGIVDVEATNAYNAAVLGGKMPHESNEAQEEAELLQAVVQSVKEGTDPVTGQEISKAQGFSIISGVIFYYAGGGYKGKKIKIPKKWLDRRRNVNRIDFLQSVNIKDFVVKDKHLRNSTAKRARKFDAETSEEANLIVQDALKNGKVKKIEDNGLGSQRQKSYSAIIDTEKNVGTKGESHIKIVYDELNNVWTVYPVPAP |
| 2LIE Chain:A ((16-83)) | ------------------------------------------------------------------------------------------------------------------------------------AVTLSAGNYIIYNRVLSPRGEKLALTYPGRQRTPVTVSPLD-----GSSEQAWILRSYDSNSNTWTISPVGSP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LIE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16368 for 357 contacts (45.8/contact) +
2D Compatibility (PS) -7248 + (NN) -306 + (LL) 9272
1D Compatibility (HY) -800 + (ID) 950
Total energy: 16336.0 ( 45.76 by residue)
QMean score : 0.160
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