Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKKAIFDSVSNMEEQIGELYQQLGDLKTNLGEMLEENNRLNLENEHLRRRLSLTDEATPEPKAETEAEHGVMAPNRKEAMQQMIELGEGYDNLVQLYKEGFHVCNVHFGSPRGNDEDCLFCLSLLNKK
2GW1 Chain:A ((281-336))
---KELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHT----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2GW1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4134 for 352 contacts (11.7/contact) +
2D Compatibility (PS) -5898 + (NN) -2892 + (LL) 4040
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -2566.0 ( -7.29 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_2GW1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GW1-query.scw
PDB file :
Tito_Scwrl_2GW1.pdb
: