Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGKPVIHEFIVVEGRDDTTAINRSVIADTIETNGSALSQETIEKIRHAQELRGVIIFTDPDFPGEKIRKQIDSAVP-----G--CKHAFINRQDALPKAGRGLGVEHASSANIREALENFHTSGAPTEKQFISKDILVHLGLLGGVGAKERREKIGNILKIGYTNGKQLQTRLESFAISEEQLVAACQKIMQEEENE
1DD9 Chain:A ((162-273))
-----EPNRLLVVEGYMDVVALAQYGINYAVASLG-STTADHIQLLFRAT--NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPD-GEDPD---T-LVRKEGKEAFEARMEQAMPL--------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1DD9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46122 for 723 contacts (-63.8/contact) +
2D Compatibility (PS) -11456 + (NN) -1651 + (LL) 6096
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -57733.0 ( -79.85 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_1DD9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DD9-query.scw
PDB file :
Tito_Scwrl_1DD9.pdb
: