Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQGDMKINATGTGAISPVNTQVPDYDELQLVAQMDELDIPNIKKDQEVKVTVTALPDKTYTGK---VKEIAEQGQVQNGVSSFSVIISLDKTDDLKAGM----TADASILVNEKKDALYVPIEAVQKDSDDKYYVLVPEEKDNGKTKKVKKFVETGLHNEDNIEITKGVKKGEKVILPTQETSTVPGAPS |
3FEX Chain:A ((152-280)) | -----------------------------------------------------------------------FVSVTQE--VPQVRRDWYVYAFLSSLP---WVGKELYEKKDAEMDRIFANTESY-----LKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLKKDRWQERHILRP---------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FEX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 6421 for 497 contacts (12.9/contact) +
2D Compatibility (PS) -9006 + (NN) 2047 + (LL) 8964
1D Compatibility (HY) -2000 + (ID) 1300
Total energy: 5126.0 ( 10.31 by residue)
QMean score : 0.089
|
|
|