Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIKGRLIFFFVVLVIALCSVLILLIIKISVWKDEPFHLSDAKEIEC-LGSCEIKNTNQKIHFFSIKENLFEEKGDIAGILNEDEQKVADKSIFIVILDDEKGIANEE
2L7S Chain:A ((1-52))
-------------------------------YRQSMNNFQGLRSFGCRFGTCTVQKLAHQIYQFTDKDKDNVAPRSKISPQGY-------------------------
General information:
TITO was launched using:
RESULT:
Template:
2L7S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8640 for 190 contacts (45.5/contact) +
2D Compatibility (PS) -5065 + (NN) -602 + (LL) 6280
1D Compatibility (HY) -400 + (ID) 300
Total energy: 8553.0 ( 45.02 by residue)
QMean score : -0.052
(partial model without unconserved sides chains):
PDB file :
Tito_2L7S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L7S-query.scw
PDB file :
Tito_Scwrl_2L7S.pdb
: