Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITFDQLDTELQALENPNTIKIFRNHGCPDSLDLYGLKIGDLKKIIRREKLTKNHELAVKLIESNNSDLIYLGLLAINPNKITTEQIEKWNIAFRETWSQLTFGLASIVSKRDDALLFAKTWI-ESDYDLTKSMGWQIYSEHINNLP-EAETLLQRAKETLQTETNRTRYSMNGFIITCGIYKDDLHEKAMEAAKSVGKVHVNLGNTACKVPDAISYIEKARNRTK |
2DB0 Chain:A ((71-148)) | -------------------------------------------------------------------------------------------------------------------LKKLFSLLKKSEAIPLTQEIAKAFGQMAKEKPELVKSMIPVLFANYRIGDEKTKINVSYALEEIAKANPMLMASIVRD--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21435 for 503 contacts (-42.6/contact) +
2D Compatibility (PS) -7720 + (NN) 640 + (LL) 10176
1D Compatibility (HY) 0 + (ID) 250
Total energy: -18589.0 ( -36.96 by residue)
QMean score : 0.496
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