Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKAKSKVARIENRYIKDTATMKKTRSRRRIALFRRLAFMAIIFAVVGGLLTITYTKQVLTLKEKKEKQVQVDKKMVAMKDEQDSLNEQIKKLHNDDYIAKLARSEYYLSKDGEIIFNIPEENSKQKE |
1KD8 Chain:B ((1-27)) | -------------------------------------------------------------------KVKQLKAKVEELKSKLWHLKNKVARLK---------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 3656 for 98 contacts (37.3/contact) +
2D Compatibility (PS) -2991 + (NN) -2207 + (LL) 9000
1D Compatibility (HY) -1600 + (ID) 300
Total energy: 5558.0 ( 56.71 by residue)
QMean score : 0.722
|
|
|