Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDYLVKALAYDGMARVYAAVTTETIKEAQRRHDTWSVSSAALGRTMTGTLFLGAMQKEDQKITVKIEGDGPIGPIVADSNAQGQIRGYVTNPHVHFSELNEAGKLDVRRGVGTSGMLSVVKDLGFGENFTGQTPIVSGEIGEDFTYYLATSEQINSSVGVGVLVNPDDTIEAAGGFMLQLLPGATDEIIDEIEKNLMALPTVSRMIEAGETPESILAKLAGGEDKLQILEKIPVSFEC-NCSKERFGSAIISLGKEEIRSMIEEDHGAEAECHFCRNTYDFSEEELKTLYEEAK |
1VQ8 Chain:Z ((20-64)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IESEMNEDHACPNCGEDRVDR----------------QGTGIWQCSYCDYKFTGGSYKPET------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VQ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -454 for 245 contacts (-1.9/contact) +
2D Compatibility (PS) -4263 + (NN) 1595 + (LL) 16136
1D Compatibility (HY) -1600 + (ID) 400
Total energy: 11014.0 ( 44.96 by residue)
QMean score : 0.243
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