Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIANSITDLIGKTPIVKLNRLP--EAGSADVYVKLEFQNPGGSVKDRIANAMIESAEKSGALKPGDTI-IEPTSGNTGIGLAMVAAAKGYQAIFVMPETMSLERRKLLQAYGAKLVLTPGPDGMKGAIAKAEELAKEN-NYFVPQQFHNPANPAVHEETTGPEIVEAFGKDGL-DAFIAGVGTGGTVTGVGHVLKKNYPDVKIYALEPEESPVLSGGSPSPHKIQGIGAGFVPDTLDTKVYDGILKVSSEDALETAREVAKKEGILVGISSGATIKAALDLAKELGAGKKVLAIVA-SNGERYLSTPLY-NFED |
| 4LMB Chain:A ((8-317)) | MLIARDITQLVGRTPLVQLNRIPVAEGVKARIVVKLESMNPAASVKDRIGVSMVEDAEAAGLIHPDKTILVEPTSGNTGIALAMVAAAKGYRLVLTMPETMSLERRAMLKAYGAQLELTPGSQGMEGAITRAEEIVENTPNAYSLQQFRNPANPKIHRETTAEEIWA--DTDGLVDIVIGGVGTGGTITGIAETIKPRRPQFQAIAVEPSNSPVLSGGQPGPHKIQGIGAGFIPAIFRPELIDEVIIVDDTEAFAYARRLARQEGLLSGISAGAALWAAIQVGKRPENEDKLIVMIQPSFGERYLSTALFKD--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73734 for 2824 contacts (-26.1/contact) +
2D Compatibility (PS) -33590 + (NN) -15262 + (LL) 436
1D Compatibility (HY) -28400 + (ID) 8200
Total energy: -158750.0 ( -56.21 by residue)
QMean score : 0.603
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