Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTRLKEDIATIIKNDPATKSFFDAFLTNPGLHALWWHRVANFFYRHKMVLFGKVLSQNARFWTNIEIHPGATIGRRLFIDHGAGIVIGETAEIGDDVTIFHGVTL--------GGTGKDCGKRHPTVGDGALVSAGAKVLGPVEIGAGARIGAGAVVLKDVPPGATVVGIPAKVVRLNGRTVGHAVPKMDELTLRIAELENIVEKLLKEKE
3Q1X Chain:A ((103-266))
----LKTDLIAAYAGDPAAPGLSLIIRCYPGFQAVIVYRIAHVLYECGERYYCREMMESVHSYTSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLGNIIVGSHVRIGANCWIDRDVDSNQTV--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3Q1X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116149 for 1224 contacts (-94.9/contact) +
2D Compatibility (PS) -16767 + (NN) -6762 + (LL) 4040
1D Compatibility (HY) -13200 + (ID) 3200
Total energy: -152038.0 ( -124.21 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_3Q1X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q1X-query.scw
PDB file :
Tito_Scwrl_3Q1X.pdb
: