Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNLFLTSSFKDVVPLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFIYVTGGNTFF-LLQELKRTGADKLILEEIAAGKLYIGESAGAVITSPNIAYIQTMDSTKKAVNLTNYDALNLVDFSTLPHYNNTPFKEITQKIVTEYAGKSQIYPISNHEAIFIRGKEVITKRLS |
| 1KA9 Chain:H ((3-91)) | --------------------------MKALLIDYG------SGNLRSAAKALEAAGFSVAVAQD--------PKAHEEADLLVLPGQGHFGQVMRAFQESGFVERVRRHLERGLPFLGICVGMQVLYEG----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KA9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35548 for 623 contacts (-57.1/contact) +
2D Compatibility (PS) -9961 + (NN) -5591 + (LL) 8536
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -45664.0 ( -73.30 by residue)
QMean score : 0.467
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