Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNLKKHSERKFDLITVGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIAIGTAKLGLKVGFIGKISDDQHGRFIEKYMRDLAINTDGMVKDTEGRKVGLAFTE--IKSPDECSILMYRENVADLYLTPEEISEDYIKEARVLLISGTALA-QSPSREAVLKAVSLARKNDVVVAFELDYRPYTWKNSEETAVYYSLVAE-QADVIIGTRDEFDMMENQVGGKNEATKAYLFQHQAKIVVIKHGVEGSFAYTKAGETFQAQAYKTKVLKTFGAGDSYASAFLYGLFSDESIETALKYGSAAASIVVSKHSSSDAMPTADEIKALIAQAE |
1WYE Chain:A ((4-308)) | ------------LITLGEILIEFNALSPG-PLRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKIDPSA-PTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDEEYVKSADLVHSSGITLAISSTAKEAVYKAFEIASNR----SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKII---LGESDPDKAAKAFSDYAEIIVMKLGPKGAIVYYD-GKKYYSSGYQVPVEDVTGAGDALGGTFLSLYYKGFEMEKALDYAIVASTLNVMIRGDQENLPTTKDIETFLRE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146573 for 2745 contacts (-53.4/contact) +
2D Compatibility (PS) -31978 + (NN) -6349 + (LL) 2008
1D Compatibility (HY) -18400 + (ID) 4250
Total energy: -205542.0 ( -74.88 by residue)
QMean score : 0.499
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