Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRKIIAVTACATGVAHTYMAAQALKKGA--KKMGNLIKVETQGATGIENELTEKDVNIGEVVIFAVDTKVRNKERFDGKVVLEVPVSAPIKDAEKVINAALALIDEK
4TN5 Chain:B ((4-94))
----LVAVTACVSGVAHTYMAAERLEKLCLLEKWG--VSIETQGALGTENRLADEDIRRADVALLITDIELAGAERFEHCRYVQCSIYAFLREPQRV-----------
General information:
TITO was launched using:
RESULT:
Template:
4TN5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 439 for 641 contacts (0.7/contact) +
2D Compatibility (PS) -9553 + (NN) -2615 + (LL) 1864
1D Compatibility (HY) 1600 + (ID) 800
Total energy: -9065.0 ( -14.14 by residue)
QMean score : 0.158
(partial model without unconserved sides chains):
PDB file :
Tito_4TN5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TN5-query.scw
PDB file :
Tito_Scwrl_4TN5.pdb
: