Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METNQILETIRMIEEEKLDIRTITMGISLLDCMDGDGEAARKKIYQKIVTKARNLVAVGEAIESEFGIPIINKRISVTPIAIIAGSSA-DTDYVEFAKTLDAAAKEVGVNFIGGYSALVQKGYTKGDEILIRSIPQALAQTERVCSSVN-VGSTRTGINMDAVRQMGEVIKETADLTADTQGLGCAKLVVFANAVEDNPFMAGAFHGVGEADCVINVGVSGPGVVKRAIEKVKGEPFDIVAETVKQTAFKITRMGQLVGQVASEKLGVPFGIVDLSLAPTPAIGDSVAHILEEMGLEMVGTHGTTAALALLNDAVKKGGVMACGHVGGLSGAFIPVSEDAGMIEAVQQGALNLEKLEAMTAICSVGLDMIAVPGDTTAETLAAMIADEAAIGVINNKTTAVRVIPASGTKVGDMVEFGGLLGTAPVMPVNGKSSVDFIARGGRIPAPIHSFKN |
| 1S99 Chain:A ((26-175)) | ---SVIKSALAATDTSKVWTKTDHISTVLRGS--------IDH----VFDAAKAIYLHAA---NSEQHIVMNGTFSIGCPGDTQGDTYL---DKRV-N--EDAVRGLKAEAPCQFAL-YPMNEPD-YMGLIMEAVDIAKA-QGTFVQGVHYASELDG-DAHDVFSTLEAVFRMAE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S99.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7269 for 999 contacts (-7.3/contact) +
2D Compatibility (PS) -15261 + (NN) -1626 + (LL) 19476
1D Compatibility (HY) 2000 + (ID) 800
Total energy: -3480.0 ( -3.48 by residue)
QMean score : 0.171
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