Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LLTKRIIPCLDVTAGR-----VVKGVNFVSLTDVGDPVEIAKAYNEAGADELVFLDITA--TVELRQT-MIDVVERTAEQVFIPLTVGGGISSVSDMKE-----------LLQAGADKISLNSAAI----KRPELIQEG---------AAKFGNQCIVVAIDAK------------------WNGTN-----WSVFT-RGGRNDTGLDAIEWAKKAVQLGAGEILLTSMDGDGTKNGYDIPLTKAISEAVSVPVIASGGCGNAAHMVEVFEKTKATAALAASIFHYGELSIKNVKTTLLEKGVNIRP |
| 1OX4 Chain:B ((241-551)) | -LTRRIIACLDVRTNDQGDLVVTKGD-------LGKPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNSGYDLELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEFTVNDVKEYLLEHGLKVR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8824 for 1887 contacts (-4.7/contact) +
2D Compatibility (PS) -25786 + (NN) 360 + (LL) 748
1D Compatibility (HY) 9200 + (ID) 1050
Total energy: -25352.0 ( -13.44 by residue)
QMean score : 0.164
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