Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRDGHTHTEFCPHGTHDDVEEMILKAIELDFDEYSIVEHAPLSREFMNNTAGDKEAVTTASMAMSDLPYYFKKMNHIKKKYASDLLIHIGFEVDYLIGYEDFTRDFLDEYGPQTDDGVLSLHFLEGQGGFRSIDFSAEDYNEGIVQFYGGFEQAQLTYLEGVKQSIEADLGLFKPRRIGHISLCQKFQQFFGADTSNFSGEVMEEFQAILALVKKRDYELDFNTAGLFKSL----CGETYPPKEIVTLARELKIPLVYGSDSHGVQDIGRGYNTYCQK |
3WYZ Chain:A ((20-191)) | -------------------DEEAHELA-SDWFDEVVFTKKLVLEDPP-------------------DWGSLKEELKELRGKY-GKVALL----LVTRKP--SLIR-EVK-SRNLKA--LLYVQGGDM---------------------------------RINRMAIE----S-GVDALISPWFGRK-DP--------------GFDHTLAGMAARRGVAIGFSLSPLLNANPYGRAQILRFMMKTWQLVKKYRVPRFITSSAESRWEVRG-PRDL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WYZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48931 for 1313 contacts (-37.3/contact) +
2D Compatibility (PS) -17567 + (NN) -5166 + (LL) 4912
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -69402.0 ( -52.86 by residue)
QMean score : 0.440
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