Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKGSFTKFKQFFIENKFVLGLLIFLLVALDIYVLTKIAFIFDPLMVILKTVAAPIILAGISYYLFNPIIDWLEKHKWKRGWAIALLYLVIIGLLILLFSFVIPAVKDQIVSLFKSFPGYWDQITQKFDEFSRSSLFDQLKDKLNTNMSDIMKTLSTKGTSVINSAISSIGSIVGTVTEVVLAIVTTPLVLFYLLKDGKKLPDFLLKMLPVNGRAHTRQVLGEANHQISSYIRGQIIVSLCIGILLFIGYLIIGLPYALTLAIIAACTSIVPYLGPAIAITPAIIIAIVTSPWLLIKLIIVWCVVQLLEGKFISPQVMGKTLKVHPITILFVILVAGNLFGVLGVIFAVPGYAVLKVIVTHVFIWFKRISGLYGEQPESEYVETPTEEKEL |
| 3P3P Chain:A ((168-213)) | ---------------------------------------------------------------------NWINKQQGKRGWGQLTSNLLLIGME----GNVTPAHYDEQQNFFAQIKGY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P3P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10334 for 167 contacts (-61.9/contact) +
2D Compatibility (PS) -5209 + (NN) -2348 + (LL) 30972
1D Compatibility (HY) -800 + (ID) 800
Total energy: 11481.0 ( 68.75 by residue)
QMean score : 0.446
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