Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKHHLSKKLFFAGLVLFIIGAIGVAFTMNTGKMIEKGEPLTKQWDLSTENIKKIAFSSERDASIEWKESTTGKNYIELKGNYSANDKKAIQQLEPVSEDGTSFDITVPEEDDWYNGFGKIYAYGKQKVTIYLTKDTKLADLEVKSHSGDIDVADFKVKKFVSSTNSGELKVTNLEANTAQMATSSGDL-----TLSNIKANSSIETDSGKTE----LTNLTGDLEVNGGSGDVNVAGVKAKKLKIAIDSGDIE---LTSGTVTDLAVLTTSSGDIDANTKGKIQAESDSGSIELAGATNNVTAKTSSGDIDVAFTKQVKNIEINSDSGEVELELPGDFKAIYEASSNSGSVKAPTSDSNTDNRVTVKTSSGDIKIEK |
| 3PWX Chain:A ((3-182)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------LSDDPMASIKLLNLERENSAIAQYQSNIANLKTTLSSQETHLDSVSESLKSMRDIVLWGANGSLTDQDRSGMITELKSYRDSIESSFNAQDEEGHFLFSGTKTDTAALNKSSGAY------VVEGNSDVRVVTVAKGVTMDSNMTAQEILDIGGGKNVLN-QIDALIAEFEKPSP-NFQAEVDASLNA----------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PWX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 57895 for 1041 contacts (55.6/contact) +
2D Compatibility (PS) -17195 + (NN) 1249 + (LL) 10944
1D Compatibility (HY) -3600 + (ID) 2300
Total energy: 46993.0 ( 45.14 by residue)
QMean score : 0.081
|
|
|