Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHPIEQLLANNNTTATDIESNTRLKEGSLQKIIDKDIRTSDISLRVLSQIAIFLNTGADIIAKQLSDIEVANDLAFLIED
3TYS Chain:A ((8-55))
---LWKLLIDRDMKKGELREAVGVSKSTFAKLGKN----ENVSLTVLLAICEYLN-------------------------
General information:
TITO was launched using:
RESULT:
Template:
3TYS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21012 for 271 contacts (-77.5/contact) +
2D Compatibility (PS) -5171 + (NN) -920 + (LL) 2496
1D Compatibility (HY) -4800 + (ID) 500
Total energy: -29907.0 ( -110.36 by residue)
QMean score : 0.657
(partial model without unconserved sides chains):
PDB file :
Tito_3TYS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TYS-query.scw
PDB file :
Tito_Scwrl_3TYS.pdb
: