Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGEMTLAFIEEQYKELDNLNNKENPAVLTRNTSTGELFVRKIIPSSFAPVIEQLKNLSSKYLPKIEVMIPKGNQLIVYEEYINGKNLADLMKTNAPFDTDEVTRLML-MLSDALTELHANAIIHRDIKPSNIMISSDGVLKLIDFDASRMFEVGKNQDTVNLGTIGYAAPE-QYGYSQTDARSDIYSIGVLMLELLLGKNTLPDKEHATSLEKIAMQAGAFDPEQRYQSIQDFRTAVKNDSLGPSYVSELSDFTELDDSPTESAWKTPADEYENDFIPWYKHIPGFRTGTPWKMIVAVFGYMFLIFGLFSPPTEGVKMSHTVNFFSNFFLIVPAFVIFTNLCGIWSKLPLLKSPSPGTRKAGIVIYIIVCVSIYGIYNEIFS |
| 2QKR Chain:A ((21-243)) | ----------EKY--LEKVGEG---VVYKAKDSQ-RIVALKRI-STAIREISLLKELHHPNIVSLIDVIHSE-CLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSD-ALKLADFGLARAFGIPVR-----VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPRE------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -76446 for 1408 contacts (-54.3/contact) +
2D Compatibility (PS) -21612 + (NN) -16208 + (LL) 10212
1D Compatibility (HY) -14800 + (ID) 2900
Total energy: -121754.0 ( -86.47 by residue)
QMean score : 0.452
|
|
|