Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGNWQQKWESWRDMTAAMQQEIKIEAAEKVTSYIKNDQFEEAINVIRQTENLLNELDFETKMNRVEEQLQAFTSDQEAAKSFEASQLQNIEKPSTKVSFDLSHVKSEAINQFTKRDFNLVDSNDTHMQFLKGNRNFYMDIFNPEESEEYHYANLDEKCQYKNIGFICQ-NDAAAEIATKLTNEWLETLEAPKKKFLTVNIANLNAMKQNPEVLFQ |
1JL3 Chain:A ((3-28)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------NKIIYFLCTGNSCRSQMAEGWAKQYL------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JL3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5225 for 99 contacts (-52.8/contact) +
2D Compatibility (PS) -2715 + (NN) -1801 + (LL) 14684
1D Compatibility (HY) -2800 + (ID) 350
Total energy: 1793.0 ( 18.11 by residue)
QMean score : 0.590
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