Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIAIGNDHVGIELKPVIVAYLQDLGHEVDDF-----GAFSNERTDYPEYGKKVAESVAAGKSDLGILICGSGVGISIAANKVNGIRAVVCSEPYSAKLSREHNNTNILAFGSRVVGAELAKMIVQNWLDAEFEG-GRHAKRVEMIARIEDEND
3K7S Chain:A ((24-169))
-RVAIGTDHPAFAIHENLILYVKEAG---DEFVPVYCGPKTAESVDYPDFASRVAEMVARKEVEFGVLACGSGIGMSIAANKVPGVRAALCHDHYTAAMSRIHNDANIVCVGERTTGVEVIREIIITFLQTPFSGEERHVRRIEKIRAIE----
General information:
TITO was launched using:
RESULT:
Template:
3K7S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100500 for 1172 contacts (-85.8/contact) +
2D Compatibility (PS) -15028 + (NN) -5300 + (LL) 420
1D Compatibility (HY) -11200 + (ID) 3000
Total energy: -134608.0 ( -114.85 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_3K7S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K7S-query.scw
PDB file :
Tito_Scwrl_3K7S.pdb
: