Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIYLDNEDVLDQAYNFAMEEYALRSLD-ENETYFMFYRMKPTIIVGKNQNTLEEINHPFVKDHHIDVLRRLSGGGAVYNDEGNISFSMIT-KDDGNSFQNFAKFTEPVIRALRKLG--VNAELSGRNDIEVNGK-KISGNAQFATKGRLYSHGTLLFDVDLSMLEKALQVDPEKYLSKGVKSVRSRVTTIREHLAEDIDILTFKQIL--LESIFETK---DIPRYTFTEADKQGIEKLRTE--RYRNWDWTYGKSPKATIKRKKRFPAGTIEFQVSLEKGQVKEATIYGDFFGTEDVAELAEKIIGCRFERKSIQNAWQEINAKDYFGGIEKEAILDMLFE |
| 3A7U Chain:A ((14-255)) | ----------DVYHNLAVEDWIHDHMNLEGKPVLFLWRNSPTVVIGRHQNPWQECNLNLMREEGVKLARRRSGGGTVYHDMGNINLTFFTTKKKYDRMENL----KLVVRALKAVHPHLDVQATKRFDLLLDGQFKISGTASKIGRNAAYHHCTLLCGTDGTFLSSLLK----------------------KNLMEKDPTLTCEVVINAVATEYATSHQIDNHIHLINPTDETVFPGINSKAIELQTWEWIYGKTPKFSV--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69173 for 1599 contacts (-43.3/contact) +
2D Compatibility (PS) -22560 + (NN) -10747 + (LL) 9104
1D Compatibility (HY) -16400 + (ID) 3100
Total energy: -112876.0 ( -70.59 by residue)
QMean score : 0.514
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