Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MTFWQ----------DMMNFFSYD---NLMYWLSEYRNLGPLLAFL-------LPFIEAFLPFLPFIVFVV--VNVNAYGLLIGF-------LISVIAAIAGSLCVFLLARKFGQTRFLRFISG----------HKQIKRVMEWIDRHGFSPIFI----LLVMPFTPSSAVNIVAGLSKIKVYQFILALVGGKLIKVFAISYIGYDFVDLIHQPLKLAILAVSVVILWF---------------VGKRLEHWMSGKNLK------------------ |
| 4DO7 Chain:A ((3-289)) | ALRIDSHQHFWRYRAADYPWIGAGMGVLARDYLPDALHPLMHAQALGASIAVQARAGRDETAFLLELACDEARIAAVVGWEDLRAPQLAERVAEWRGTKLRGFRHQLQDEADVRAFVDDADFARGVAWLQANDYVYDVLVFERQLPDVQAFCARHDAHWLVLDHAGKPALAEFDTALARWRAALRELAALPHVVCKLSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGSDWPVCLLAASYDEVASLVERWAESRLSAAERSALWGGTAARCYALP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DO7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206579 for 1313 contacts (-157.3/contact) +
2D Compatibility (PS) -20574 + (NN) 4140 + (LL) 0
1D Compatibility (HY) -400 + (ID) 1700
Total energy: -225113.0 ( -171.45 by residue)
QMean score : 0.172
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