Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVYATFSKGNELLVSVMGTVLLLLVLLIPFFVVGIATMLIVNGRLMLKREGRKLANMLPLIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGANE------T--ISEAEAMRGYLIEQGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLFRAGIYARKAGLKSQGIGAKTALYYMPNALIREFIAITVMYKKVHMVLLGLLLLFFAFLAIIGVTFR |
| 1R1M Chain:A ((25-93)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLRAEAQDNLKVLAQRLSRTN-----IQSVRVEGHTDFMGSDKYNQALSERRAYVVANNLVSNGVPVSRISAVG----------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1R1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -31463 for 341 contacts (-92.3/contact) +
2D Compatibility (PS) -6435 + (NN) -3997 + (LL) 25908
1D Compatibility (HY) 400 + (ID) 350
Total energy: -15937.0 ( -46.74 by residue)
QMean score : 0.605
|
|
|